Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycena_20chlorophos_20[genbank_20GCA_5F001612595.1_202016-04-02] 25,660 sequences; 43,602,020 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq11362 154 1e-32 seq20985 147 2e-30 seq4899 93.3 4e-14 seq20986 84.2 2e-11 >seq11362 Length=37670 Score = 154 bits (170), Expect = 1e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | ||||| || ||||| ||||||||| ||||| ||||| || Sbjct 29496 GCCGCCACGGAGACGCAGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGA 29555 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| ||||| |||| |||||||||||||| || || || ||||| || || |||| || Sbjct 29556 GAGCGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGTTGCTGATCCGGCGG 29615 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || |||| ||| | | | ||||| ||||| | Sbjct 29616 GATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTGTCAATCGTGTCCGAGGACTCGA 29674 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| ||| ||||| || || || |||||||| ||||| || ||||| Sbjct 29675 CCTCCAACGTGATCGTCTTGCCTGTGAGCGTCTTGACGAAGATTTGCAT 29723 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 |||||| || || ||| ||||||||| ||||| |||||| | |||||| | || || Sbjct 30117 CACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCCTC 30176 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||||||||||||| || |||||||||||||| | |||| | |||||||||| | Sbjct 30177 GAGCTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCGGGCGGAATACCCTCCTTGTCC-T 30235 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | ||| | | | ||||| ||||| ||||| | || || || | Sbjct 30236 GAATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTCT 30295 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || |||| |||||| || || |||||||| Sbjct 30296 TGCCAGTCAACGTCTTGACAAAGATCTGCAT 30326 Score = 102 bits (112), Expect = 8e-17 Identities = 140/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 41675 TTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 41734 ||||| ||||| || || ||||||||||| | || || ||||||||||| ||||| || Sbjct 30416 TTCTGGATGTTGTAATCCGAGAGGGTGCGACCATCTTCAAGCTGCTTGCCAGCGAAGATG 30475 Query 41735 AGGCGCTGTTGGTC-CGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGAC 41791 |||||||||||||| |||||| | | ||||||||| ||| || ||| || | | Sbjct 30476 AGGCGCTGTTGGTCAGGCGGGATC-CCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTC 30534 Query 41792 GACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | ||||| ||||| ||||| | || || || || || |||| ||||| ||| Sbjct 30535 G--ATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACG 30592 Query 41852 AAAATCTGCAT 41862 || || ||||| Sbjct 30593 AAGATTTGCAT 30603 Score = 82.4 bits (90), Expect = 7e-11 Identities = 120/167 (72%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||||||||| ||||| || || || || | || || Sbjct 29792 ACCAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGAGTACGTCCATCCTCA 29851 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || || ||||| ||||| || |||||||| || || | || | | ||| |||||| || Sbjct 29852 AGTTGTTTGCCCGCGAAGATAAGGCGCTGCTGATCAGGCGGGATTCCCTCTTTGTCC-TG 29910 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCA 41819 | || |||| ||| | | | ||||| |||||| |||| || Sbjct 29911 GATCTTGGCTTTGACGTTGTCAATCGTGTCCGACGACTCGACCTGCA 29957 >seq20985 Length=2931 Score = 147 bits (162), Expect = 2e-30 Identities = 150/193 (78%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| ||||| |||||| | ||| || |||| |||||||||||||| || || Sbjct 2110 CTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGACCGTCTTCGAGCTGCTTGCCAGCAAA 2169 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 ||||||||||| ||||||| || | || |||||||||| ||| ||||||| | ||| Sbjct 2170 AATCAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC-TGAATTTTTGCCTTGACGT 2228 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | |||||||| ||||| ||||||| || || || || || || || ||||| | Sbjct 2229 TGTCGATCGTGTCGCTAGACTCGACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTGA 2288 Query 41850 CGAAAATCTGCAT 41862 |||| |||||||| Sbjct 2289 CGAAGATCTGCAT 2301 Score = 100 bits (110), Expect = 3e-16 Identities = 113/149 (76%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 41669 CTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCG 41728 ||| | ||||||||||| ||||| || || ||||| |||| ||||||||||| || ||| Sbjct 2435 CTCACTTTCTGAATGTTGTAGTCAGAAAGAGTGCGACCGTCCTCGAGCTGCTTTCCAGCG 2494 Query 41729 AATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAAC 41788 || || |||||||| ||||||| || | | |||||||||| || | || || | || Sbjct 2495 AAAATAAGGCGCTGCTGGTCCGGCGGGATTCCCTCCTTGTCC-TGGATCTTCGCCTTGAC 2553 Query 41789 GACGAC-ACAGTGTCGCTCGACTCCACCT 41816 | | | | ||||||||||| || |||| Sbjct 2554 GTTGTCGATCGTGTCGCTCGATTCGACCT 2582 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||||||||| ||||| || ||||| || | || ||||||||||| || ||||| | Sbjct 2813 CCTTCTGAATGTTGTAGTCAGAAAGGGTACGACCATCCTCGAGCTGCTTCCCAGCGAAGA 2872 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTT 41778 | || ||||| ||||| | || | | |||||||||| ||| || Sbjct 2873 TGAGACGCTGCTGGTCGGGCGGGATTCCCTCCTTGTCCTGGATCTT 2918 >seq4899 Length=71473 Score = 93.3 bits (102), Expect = 4e-14 Identities = 94/121 (78%), Gaps = 1/121 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| ||||||| ||| ||||||||| ||||| |||||| Sbjct 46683 CCACCACGCAGACGCAGCACGAGATGCAACGTCGACTCCTTCTGGATGTTGTAGTCGCTC 46624 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 || || ||| | || |||||||||||||| ||||| || || ||||| ||||| ||||| Sbjct 46623 AGCGTACGCCCATCCTCGAGCTGCTTGCCCGCGAAAATGAGACGCTGCTGGTCGGGCGGG 46564 Query 41755 A 41755 | Sbjct 46563 A 46563 >seq20986 Length=4064 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||| || ||||| || |||| |||||||||||||| ||||| | Sbjct 254 CCTTCTGGATGTTGTAGTCCGAAAGGGTACGTCCGTCCTCGAGCTGCTTGCCCGCGAAGA 313 Query 41733 TCAGGCGCTGTTGGTC 41748 | |||||||| ||||| Sbjct 314 TGAGGCGCTGCTGGTC 329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462155715992000