Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq24 147 3e-30 seq84 95.1 2e-14 >seq24 Length=290538 Score = 147 bits (162), Expect = 3e-30 Identities = 181/245 (74%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| | ||| || || ||| ||| ||||||||||||| || || ||||| || Sbjct 19182 AACAAGAGACAAGCAAAGTCGGTGTGAAGACCCTCGTCTCGCGAGATGAGCTCGTTTGAG 19123 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || |||||||| || || || || || ||||| || |||||||||||||| || Sbjct 19122 AATGTAAGACCGGGCATGAGTCCTCGTTTCTTGAGCCAGAAGATGGACGCAAATGATCCT 19063 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG--CGC 50128 ||||||||||| || ||||| ||||||||||| | | || ||| || | ||| || Sbjct 19062 GAAAAGAAGATACCCTCTACAGCGGCAAAGGCGATCAATCGCTCAGCAAATGTGGATCGT 19003 Query 50129 T-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 | |||| |||||||| | ||||| | ||||||||||| | ||| || || || || Sbjct 19002 TGGTCAGAGATCCACTTGAGTGCCCAGTTGGCCTTCTTTTGGATACATGGGATAGTGTCG 18943 Query 50188 ATGGC 50192 ||||| Sbjct 18942 ATGGC 18938 >seq84 Length=171189 Score = 95.1 bits (104), Expect = 2e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 49981 CCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 50040 |||||||||| ||| |||||||| ||||| || | ||| ||||| | || || ||| Sbjct 164326 CCCTCGTCTCGCGAAATCAGTTCGTTTGAAAAAGTCAATCCAGGCATCAATCCTCGTTTT 164267 Query 50041 TTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTAC 50090 || ||||||||||||| |||||||||||||| ||||| || || || || Sbjct 164266 TTCAGCCAAAATATGGCTGCAAATGACCCAGAGAAGAAAATGCCCTCGAC 164217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267444267640