Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq84 109 5e-19 >seq84 Length=171189 Score = 109 bits (120), Expect = 5e-19 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740 ||||| |||| ||| |||||||||||||| || ||||| |||||||||||||||||| Sbjct 164326 CCCTCGTCTCGCGAAATCAGTTCGTTTGAAAAAGTCAATCCAGGCATCAATCCTCGTTTT 164267 Query 13741 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAAC 13790 || | ||||||||| || || ||||| || || ||||| || ||||| || Sbjct 164266 TTCAGCCAAAATATGGCTGCAAATGACCCAGAGAAGAAAATGCCCTCGAC 164217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478587896663640