Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq24 87.8 2e-12 >seq24 Length=290538 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 13187 ATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATA 13246 || ||||||||||| ||||| ||||| ||||| || |||||||| || | ||| || || Sbjct 19137 ATGAGCTCGTTTGAGAATGTAAGACCGGGCATGAGTCCTCGTTTCTTGAGCCAGAAGATG 19078 Query 13247 GCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAA 13299 | ||||| || || ||||| || || || || || || ||||| || ||||| Sbjct 19077 GACGCAAATGATCCTGAAAAGAAGATACCCTCTACAGCGGCAAAGGCGATCAA 19025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430981606857702