Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq123 113 5e-20 >seq123 Length=96366 Score = 113 bits (124), Expect = 5e-20 Identities = 237/348 (68%), Gaps = 8/348 (2%) Strand=Plus/Plus Query 7063 GGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTT-AT 7121 |||||||||||| | | | ||| | |||||| ||||||| |||||||| || || || Sbjct 1285 GGATTCCAAGCACTTAGGACAATCCTTCTATCCGTTGGATTA-TTTTTAATCTTATTGAT 1343 Query 7122 AATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATT 7181 | |||||||||| || | ||| ||||||| | |||||| | ||| | Sbjct 1344 GACGTCCATCAATTGATCTACGCCTTTACCCTCATAATCATCTTGACAAGTCCCATACTC 1403 Query 7182 AGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATG 7241 || || ||||||||||||||||| ||||| | ||||||| ||| ||| || | ||| Sbjct 1404 TGCGCCGAAATGTCTCCATTGAAAGCCATATACCGGACCTAGATCGCCTGCTCTTCTATG 1463 Query 7242 ATTAAATCCTAATCGATTTAAATTAGATT-TTGA--TCCATAAGCATCCCAAATATGTAC 7298 || ||||| | | || || || ||| | || |||| ||||||| |||| || Sbjct 1464 GTTCAATCCAACTTTATCTAGAT---ATTCTCGACTACCATTCCCATCCCATATATTCAC 1520 Query 7299 AGAtttttttGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATAAAAGTTCTTC 7358 ||| |||||| | | || || ||||| | ||||||||| || ||||| Sbjct 1521 TCCCTTTGAAGATAAAACTTTACCATCCGTGCATCCTGAGACGAACCATAAGAGCTCTTC 1580 Query 7359 TACTATTCCACGCCAAAACATTCTTTTTGTAGTGAATAAAGGGAATGT 7406 || | |||||| ||| | || ||| ||||| ||||| || || || Sbjct 1581 AACCACTCCACGTAGAAAAACTCGTTTCGTAGTCAATAATGGCAAGGT 1628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595870875291600