Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq94 95.1 2e-15 seq64 91.5 2e-14 >seq94 Length=141334 Score = 95.1 bits (104), Expect = 2e-15 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || ||||||||||| ||||| |||||||| ||| | |||||||| || || ||| ||||| Sbjct 61559 GGTATCACCAAGCCTGCTATTCGTCGTCTCGCTAGACGTGGTGGTGTTAAACGTATCTCT 61618 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCT 16571 || || |||| ||||||| ||| | |||| | ||||||| Sbjct 61619 GGTCTGATCTACGAAGAGACTCGAGGTGTTCTCAAGATCT 61658 >seq64 Length=1322930 Score = 91.5 bits (100), Expect = 2e-14 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || ||||| ||||| ||||| || || |||| || || ||||| || |||||| ||||| Sbjct 162589 GGTATCACTAAGCCTGCTATTCGACGATTGGCACGACGAGGTGGTGTTAAGCGTATCTCT 162648 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCT 16571 |||||| |||| ||||||| |||| |||| | ||||||| Sbjct 162649 GGATTGATCTACGAAGAGACCCGTGGTGTTCTCAAGATCT 162688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075061939643