Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq24 105 7e-18 >seq24 Length=290538 Score = 105 bits (116), Expect = 7e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 21518 TCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCA 21577 || || || ||||| | ||||||||| | ||||| || || | ||| || || |||||| Sbjct 19131 TCGTTTGAGAATGTAAGACCGGGCATGAGTCCTCGTTTCTTGAGCCAGAAGATGGACGCA 19072 Query 21578 AATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTAT 21637 |||| |||||||||||| || ||||| || || ||||| || | ||||| ||| | || Sbjct 19071 AATGATCCTGAAAAGAAGATACCCTCTACAGCGGCAAAGGCGATCAATCGCTCAGCAAAT 19012 Query 21638 GTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACA 21693 || ||| || || | ||||| || |||||| || ||||| | || ||||| Sbjct 19011 GTGGATCGTTGGTCAGAGATCCACTTGAGTGCCCAGTTGGCCTTCTTTTGGATACA 18956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531899796037240