Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq77 89.7 4e-13 >seq77 Length=196091 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AAGC 25080 || ||||| | ||||| | || || ||||| || ||||| ||||| || || ||| Sbjct 17891 ACGGGTAAGACGATCACCCTTGAGGTCGAGTCCTCGGACACGATCGA--CAATGTCAAGT 17834 Query 25081 AAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140 || ||| ||||| || || || ||||| ||||||||||| | || || ||||||| Sbjct 17833 CCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAACAGCGACTCATCTTCGCCGGCA 17774 Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTAC 25200 | || | || |||| ||| || || ||| |||||||| || || || ||||| || | Sbjct 17773 AGCAGCTCGAGGATGGTCGTACCTTGTCCGACTACAATATCCAGAAGGAGTCCACTCTCC 17714 Query 25201 ATTTAGTGCTAAGGCTAAGAGGAGG 25225 | | || | ||||| |||| || Sbjct 17713 ACCTCGTCTTGAGGCTGCGAGGTGG 17689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327202541065