Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq57 98.7 2e-15 >seq57 Length=262963 Score = 98.7 bits (108), Expect = 2e-15 Identities = 113/150 (75%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| | ||||| || ||| | |||| | || ||||| |||||| || | Sbjct 250514 GGTCCCAACGGTTCCGGTAAATCCACCTTGGTCAAGCTGCTCACTGGTGAGACCGAGCCT 250455 Query 280239 AC--TGAGGGGTCC-GTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | || | ||| | || |||||||| |||||| || || | |||||| || || ||| Sbjct 250454 AACATGGGCGGTACTGTCTGGAAGCACCCCAACTTGGTCATTGGTTACGTTGCCCAACAC 250395 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGAC 280325 || |||||||||||||| |||||||||||| Sbjct 250394 GCCTTCCACCACATCGACAACCACCTGGAC 250365 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 280713 ATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAA 280772 || || ||||| ||||| || ||||||||||| | || | || || || |||| | Sbjct 249917 ATGCGAGGTCTCTCTGGTGGACAGAAGGTCAAGGTCGTTCTTGGTGCCGCCACTTGGCGA 249858 Query 280773 CACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGC 280832 | || ||||| ||| ||| |||||||||||||||||||| ||||| ||| ||| | Sbjct 249857 CGACCCCACGTTATCTGTCTGGACGAGCCTACCAACTATCTCGACCGAGAGTCCCTCGCT 249798 Query 280833 GCTCTGAGTGCTGCTCT 280849 || |||| |||||| || Sbjct 249797 GCCCTGATTGCTGCCCT 249781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027834811456991