Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq24 93.3 4e-14 >seq24 Length=290538 Score = 93.3 bits (102), Expect = 4e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| | | ||| || | || | || || || || || |||||||| ||||| Sbjct 53794 ACCACCACGCAAACGCAAGACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCT 53735 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||| || ||||| |||||||| || ||| ||||||| ||||||||||| ||||| Sbjct 53734 CAGAGTGCGGCCGTCTTCGAGTTGTTTTCCCGCGAAGATGAGTCGCTGTTGGTCAGGAGG 53675 Query 114275 AATGCCTTC 114283 ||| ||||| Sbjct 53674 AATACCTTC 53666 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || || ||||| ||| | || || |||||||| || || || Sbjct 53206 GTCGATTCCTTCTGGATATTGTAGTCGGAGAGCGTTCGGCCGTCTTCAAGCTGCTTGCCG 53147 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| || || || || || || || ||||| ||||| ||| Sbjct 53146 GCGAAGATGAGACGCTGCTGATCAGGTGGGATACCCTCCTTGTCCTGGATCTTCGCTTTG 53087 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||| |||| |||||||| || | || | || |||||||| || || Sbjct 53086 ACGTTGTCAATGGTATCGGACGATTCGACCTCAAGCGTGATAGTCTTGCCGGTAAGGGTC 53027 Query 114366 TTTACAAAAATCTGCAT 114382 ||||| || || ||||| Sbjct 53026 TTTACGAAGATTTGCAT 53010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133626821412