Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20]
151 sequences; 19,786,307 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1 165 1e-35
seq24 113 5e-20
>seq1
Length=1646047
Score = 165 bits (182), Expect = 1e-35
Identities = 542/834 (65%), Gaps = 29/834 (3%)
Strand=Plus/Plus
Query 114386 AGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGAGT 114444
|| || |||||||| ||||| | ||| || || ||||| | | | ||| | ||| ||
Sbjct 679219 AGGTTCTTGGTGACCACCTTGGCGATCTCGTGGAGCTTCTTGAAGTCATAGACTC---GT 679275
Query 114445 CTCTTCATT--GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCA 114502
| || ||| ||| | |||||| || | || |||| || || || | | ||||
Sbjct 679276 CGCTCCATGTCGACGAAGGCAGGAAGAGCAAGCGAGGCCAAGTTGCAGACTGCGACCTCA 679335
Query 114503 TCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAG 114562
|| ||| |||||| || || || || || | || || ||| || || || | |
Sbjct 679336 TCTGGTGCAGAGTACTCAATGATCTCAGTGCATAGGTTGGATGACTTGATCGTCCCGAGG 679395
Query 114563 TTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTC 114622
| || ||| || || || | ||| || || |||||||||||| | || | || |||
Sbjct 679396 TGCTGTTGGTTGGATTTGGCGTTGGCGGCGTCTTTGTAAAGCATGAAGGGGTTACCGGTC 679455
Query 114623 TCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGC 114681
|| || |||| || ||| || || ||| | | || | | || | ||| |||
Sbjct 679456 TCGGTCTGGGCCTCGAGGATGGCGAACCAAAGCTTCTGTGCCTTGA----TGGTCTTG-- 679509
Query 114682 TCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGC 114735
|| |||| ||| |||||| | ||| ||| ||||||||||| || |
Sbjct 679510 -CGACCCTTGCCAGCCTTCTCGTAGCTCTCGTACAGGCGCTCAAACTCTTCGCCGTGGCA 679568
Query 114736 CTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAAC 114795
|| || || || || || | ||||| | | || ||| | ||| | || ||
Sbjct 679569 GTCGGAAAGACCGGGGCACTCTGCAGGGCACATTAAAGTCCAATCACCGTCAGATTCGAC 679628
Query 114796 ACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTC 114855
||||||||||| || |||| |||||| || || |||| || || || ||| | ||
Sbjct 679629 TCGCTTCATGAAAAGATCTGAGATCCACAGTGCGTAGAACAGGTCTCGGGCGCGGACCTC 679688
Query 114856 TTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTC 114915
||| | || || || || | || | ||||| | || ||| || ||||| || ||
Sbjct 679689 TTCCTTGCCGTGGTTCTTGCGAAGGTCGAGGAAGTCAAAGACATCGGCATGCCAAGGCTC 679748
Query 114916 CAGGTACACCGCGATTG-ACCC-----CTTACGACGACCAGCCTGGTTTACATACCTCGC 114969
||||| | || | || |||| ||| | | ||| | || | || || | ||
Sbjct 679749 GAGGTAAATGGCAAATGCACCCGGTCGCTT--GTTG-CCACCTTGATCGACGTAACGAGC 679805
Query 114970 TGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCG 115029
||||||| || | || ||||| || | ||||| | || | ||||||||| ||
Sbjct 679806 GGTGGCATCGAAGGCTCGGAGCATGGGCACAATACCGTTGGAGTAGCCATTTGTACCGGC 679865
Query 115030 AATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTT 115089
||| ||| || || | || | |||||||| | ||| ||||| ||||| |||
Sbjct 679866 AATGTAAGAGCCCTTTGCCCGGATGTTGTGGATGTGGAGACCGATACCACCTGCGGTCTT 679925
Query 115090 TGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATT 115149
||||| | || || | |||| | ||||||| ||||||||||||||| ||| |
Sbjct 679926 GGAGATCTTGGCACAAGTCTTGAGGGTCTCGTAGATACCGTCGATCGAGTCATCCTGCAT 679985
Query 115150 TGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAG 115203
||||| ||||||||| ||||||||| || |||||||| |||||||||||
Sbjct 679986 TGCGACGAGGAAGCAGGACGACATTTGAGGGTGAGGTGTACCGGCGTTGAAGAG 680039
>seq24
Length=290538
Score = 113 bits (124), Expect = 5e-20
Identities = 175/246 (71%), Gaps = 8/246 (3%)
Strand=Plus/Minus
Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106
||||| || ||| ||||||||||| || |||||||| || || ||||| || ||
Sbjct 19170 GCAAAGTCGGTGTGAAGACCCTCGTCTCGCGAGATGAGCTCGTTTGAGAATGTAAGACCG 19111
Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166
|||||||| || || ||||| | |||||| || | |||||| || || ||||||||
Sbjct 19110 GGCATGAGTCCTCGTTTCTTGAGCCAGAAGATGGACGCAAATGATCCTGAAAAGAAGATA 19051
Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGA-CTTTGTGTCA-- 126223
||||| ||| || || || | | ||||||||||| | | || | ||| ||||
Sbjct 19050 CCCTCTACAGCGGCAAAGGCGATCAATCGCTCAGCAAATGTG---GATCGTTG-GTCAGA 18995
Query 126224 -AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282
| |||||| | ||||| | ||||| || | |||||| |||| || | ||| |||||
Sbjct 18994 GATCCACTTGAGTGCCCAGTTGGCCTTCTTTTGGATACATGGGATAGTGTCGATGGCTTC 18935
Query 126283 AAAGAG 126288
|| ||
Sbjct 18934 GAATAG 18929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597352472495080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |