Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 197 1e-45 >seq1 Length=1646047 Score = 197 bits (218), Expect = 1e-45 Identities = 486/735 (66%), Gaps = 8/735 (1%) Strand=Plus/Minus Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAG 93963 || |||||||| || || || || || ||||| || || ||||| | | | || Sbjct 680039 CTCTTCAACGCCGGTACACCTCACCCTCAAATGTCGTCCTGCTTCCTCGTCGCAATGCAG 679980 Query 93964 GCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023 | ||||| ||| ||| || | ||| | ||||||| ||||| | ||||| || | Sbjct 679979 GATGACTCGATCGACGGTATCTACGAGACCCTCAAGACTTGTGCCAAGATCTCCAAGACC 679920 Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083 || || || ||||| || ||||| || | || || | ||| || ||||| |||| Sbjct 679919 GCAGGTGGTATCGGTCTCCACATCCACAACATCCGGGCAAAGGGCTCTTACATTGCCGGT 679860 Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143 || |||||| ||||||||| | || || |||||||| | |||| | | | || || Sbjct 679859 ACAAATGGCTACTCCAACGGTATTGTGCCCATGCTCCGAGCCTTCGATGCCACCGCTCGT 679800 Query 94144 TACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGG 94203 ||||| || || ||||| | | | |||| | || || | || |||||||| ||| Sbjct 679799 TACGTCGATCAAGGTGGCAACAAGCGACCGGGTGCATTTGCCATTTACCTCGAGCCTTGG 679740 Query 94204 CACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGG 94263 || || || || | ||| ||||||| || |||||||||||||| || || | Sbjct 679739 CATGCCGATGTCTTTGACTTCCTCGACCTTCGCAAGAACCACGGCAAGGAAGAGGTCCGC 679680 Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAA 94323 ||| ||||||| |||||||| || ||| | |||| ||||| ||||| || ||||| Sbjct 679679 GCCCGAGACCTGTTCTACGCACTGTGGATCTCAGATCTTTTCATGAAGCGAGTCGAATCT 679620 Query 94324 AACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGA 94383 || | |||| | | | || || || || ||||| || |||||| || | Sbjct 679619 GACGGTGATTGGACTTTAATGTGCCCTGCAGAGTGCCCCGGTCTTTCCGAC---TG-CCA 679564 Query 94384 TCGCG----TTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGT 94439 ||| ||||| | |||| | | ||||| | ||||||| | ||| Sbjct 679563 CGGCGAAGAGTTTGAGCGCCTGTACGAGAGCTACGAGAAGGCTGGCAAGGGTCGCAAGAC 679504 Query 94440 TATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCC 94499 || | || |||||| ||| ||| | || | ||| ||||| |||| || Sbjct 679503 CATCAAGGCACAGAAGCTTTGGTTCGCCATCCTCGAGGCCCAGACCGAGACCGGTAACCC 679444 Query 94500 CTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGAT 94559 || ||| | | ||| ||| | | ||||||||| |||||||| |||||||||||| ||| Sbjct 679443 CTTCATGCTTTACAAAGACGCCGCCAACGCCAAATCCAACCAACAGCACCTCGGGACGAT 679384 Query 94560 CAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGT 94619 |||| || || || ||||| ||||| | ||||| || | || || ||| | || || Sbjct 679383 CAAGTCATCCAACCTATGCACTGAGATCATTGAGTACTCTGCACCAGATGAGGTCGCAGT 679324 Query 94620 GTGTAACCTGGGCTC 94634 || ||| ||| ||| Sbjct 679323 CTGCAACTTGGCCTC 679309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722266209960