Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 2e-15 >seq1 Length=1646047 Score = 98.7 bits (108), Expect = 2e-15 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 203849 GTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTA-CATGCCGGTCTTTAG 203907 || ||||| || || | | | |||| || | | || ||||| ||| || ||||| || Sbjct 678310 GTAAACTGGATTGCCTGTGCTGAAGGCTTGGTGCGGAGGTAGTAGCAT-CCAGTCTTGAG 678368 Query 203908 GCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCAT 203967 ||| ||| ||| ||||| | |||||| || | |||| | | | |||| ||| | Sbjct 678369 ACCCCTCTTCCATCCGTAGAAGTGCATCGAGGTGAGTTGGGAAAAGGATGGGTTGGCAAG 678428 Query 203968 GTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGA 204026 ||| ||||| || ||||| |||||||| ||||||||| || |||||||| | || || Sbjct 678429 GTGGATGTTGAGCGACTGAGACTGGTCGAT-AAAGGCGCCTCGGTCTGCGGCGAGATCGA 678487 Query 204027 TAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 | | | ||| || ||||||||||| || |||||| Sbjct 678488 TGACAGCCTTTTGTGAAATCTCCCAGACGGTCTTG 678522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153699144560