Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq50 107 8e-18 >seq50 Length=5760 Score = 107 bits (118), Expect = 8e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 || |||||||| || ||||||||||| || ||||| || || ||||| ||| || Sbjct 5411 CCAGAAGAAATCTCCTCTATGGTTCTCGTCAAGATGAAGGAGACCGCAGAGGCATACCTT 5352 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 ||| | | || || | || || | ||||||||||| || ||||| || | || || Sbjct 5351 GGTGGTACTGTCACCAAGGCCGTTGTCACTGTTCCCGCCTACTTCAACGACTCTCAGCGT 5292 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 |||||||| || || |||||| ||||||||| | | || || || || ||||| ||| Sbjct 5291 CAAGCAACCAAGGACGCAGGAACCATTGCTGGTCTTGACGTCCTCCGTATCATTAACGAA 5232 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACT 451452 || || || || || | ||||| || || Sbjct 5231 CCCACTGCCGCCGCCATCGCATACGGTCT 5203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975714577602308