Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq50 123 2e-22 seq63 86.0 5e-11 >seq50 Length=5760 Score = 123 bits (136), Expect = 2e-22 Identities = 272/406 (67%), Gaps = 10/406 (2%) Strand=Plus/Plus Query 517985 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 518044 |||| |||||| || | |||| | | || || || || ||||| || ||||| ||| Sbjct 5014 TTTCGCTTGAACTCCTGAACAAAGTGGTTGACGAGTCGGTTGTCAAAGTCCTCACCACCC 5073 Query 518045 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 518104 || | ||| | |||| || || | || | ||| | || || || | | ||||||| Sbjct 5074 AAGTGAGTGTCACCTGCAGTGGCCTTGACCTCGAAGATACCCTCATCGATGGTCAAAAGA 5133 Query 518105 GTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT-----TTGT 518159 | ||||| ||| ||||| |||| || || || || || || || || |||| Sbjct 5134 GACACATCGAAGGTACCACCTCCCAAGTCGAAGATGAGGACGTT--TTGCTCGCCCTTGT 5191 Query 518160 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 518219 ||| | || || ||||| || || | || || ||||| ||||| ||||| || | | Sbjct 5192 CTT---TCTTGTCGAGACCGTATGCGATGGCGGCGGCAGTGGGTTCGTTAATGATACGGA 5248 Query 518220 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAA 518279 || | |||||||||||| ||||||| || || || ||||| | || || ||||| | Sbjct 5249 GGACGTCAAGACCAGCAATGGTTCCTGCGTCCTTGGTTGCTTGACGCTGAGAGTCGTTGA 5308 Query 518280 AATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCG 518339 | || || |||||||| | |||||| | || || ||||| || || ||| | Sbjct 5309 AGTAGGCGGGAACAGTGACAACGGCCTTGGTGACAGTACCACCAAGGTATGCCTCTGCGG 5368 Query 518340 TTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGA 518385 | | ||||| || | || ||| || || |||| |||||| || Sbjct 5369 TCTCCTTCATCTTGACGAGAACCATAGAGGAGATTTCTTCTGGTGA 5414 >seq63 Length=232836 Score = 86.0 bits (94), Expect = 5e-11 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 518450 TTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATT 518509 || |||||||||| || | |||| |||||| |||| | ||| | || || Sbjct 104953 TTGAATGGCCAGTGCTTGACATCTTTCTGAACATCCGGGTCGTCGAAAGTGCGTCCGATC 104894 Query 518510 AATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCA 518569 || ||||| || ||||| | ||||||| || || | ||| |||| |||||||||| Sbjct 104893 AAGCGTTTAGCGTCAAATACGGTATTGGAAGGGTTTTGAGGAGCCTGATTTTTGGCTGCA 104834 Query 518570 TCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCT 518629 |||||||||| | | ||| || || || ||| |||| || || | || || || Sbjct 104833 TCTCCAATCAAACGCTCTTCTTCCGTGAAGCCAACCCATGAGGGTGTAATTCGGTTGCCC 104774 Query 518630 TGATCATTCGCAATAATTTCAACTTTACCA 518659 || || || ||||| ||||| ||||| ||| Sbjct 104773 TGGTCGTTGGCAATGATTTCGACTTTGCCA 104744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780814906882606