Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq50 196 6e-45 seq130 145 1e-29 seq1 100 4e-16 >seq50 Length=5760 Score = 196 bits (216), Expect = 6e-45 Identities = 255/353 (72%), Gaps = 0/353 (0%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || || || || ||||| || |||||||| Sbjct 5056 TCAAAGTCCTCACCACCCAAGTGAGTGTCACCTGCAGTGGCCTTGACCTCGAAGATACCC 5115 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | || | || ||||| || |||||||| |||| ||| || ||||| ||| Sbjct 5116 TCATCGATGGTCAAAAGAGACACATCGAAGGTACCACCTCCCAAGTCGAAGATGAGGACG 5175 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | ||||| ||||||||||| ||||| || || || || ||||| Sbjct 5176 TTTTGCTCGCCCTTGTCTTTCTTGTCGAGACCGTATGCGATGGCGGCGGCAGTGGGTTCG 5235 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 ||||| ||||| || || || |||||||| ||| | || || || || ||||| || Sbjct 5236 TTAATGATACGGAGGACGTCAAGACCAGCAATGGTTCCTGCGTCCTTGGTTGCTTGACGC 5295 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| || || || || || || | ||||| | ||| || Sbjct 5296 TGAGAGTCGTTGAAGTAGGCGGGAACAGTGACAACGGCCTTGGTGACAGTACCACCAAGG 5355 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || | || ||| | || ||||| ||| |||||||| || || || ||||| Sbjct 5356 TATGCCTCTGCGGTCTCCTTCATCTTGACGAGAACCATAGAGGAGATTTCTTC 5408 Score = 165 bits (182), Expect = 1e-35 Identities = 530/821 (65%), Gaps = 6/821 (1%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 || || || || || |||| || || ||| ||||| ||||| || ||||| ||| Sbjct 4113 TCGTCCTCGTCCTTGAACTTCTCGGCCTCTGAAACCATGCGCTCAATCTCCTCTTTTGAT 4172 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| || ||||| || || ||| | | || ||| || | | ||| || || Sbjct 4173 AGACGTCCCTTGTCGTTCGTGATTGTGATCCTGTTGGTTTTGCCGGTAGTCTTGTCGGCA 4232 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || || || | ||||| || || |||||||||||| || | ||||| || | Sbjct 4233 GCGCTGACGTTGAGGATACCGTTGGCGTCAACATCGAACGAAACCTCGATTTGAGGAACA 4292 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || |||| || || | | | || || | || || | || ||| | Sbjct 4293 CCTCGGGGAGCGGGGGGGATGCTGGAGAGCTCGAACTTTCCGAGGAGGTTGCAGTCCTTT 4352 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | ||| ||| ||||| || |||||| || ||| |||| || || || Sbjct 4353 GTCTTGGCACGCTCACCCTCGAAGACTTGGATAAGCACACCAGGCTGGTTGTCGGAATAA 4412 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || |||||||| | ||||| | || | ||||| |||| | || | ||| ||| Sbjct 4413 GTGGAGAAGATCTCGGACTTCTTGGTGGGGACAGTCGTGTTTCGCTTGATGAGCGGTGTC 4472 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| ||||||| || | || ||||| | ||||| | || | || Sbjct 4473 ATGATACCACCAGCGGTTTCGATACCCATGGAAAGAGGAGCGACGTCGAGCAGGAGGAGA 4532 Query 6989 TCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTAT 7048 || || | ||| ||||| || | ||| || ||||| || | || ||||| Sbjct 4533 TCCTGGGTGGCCTCGGAAGTGTCACCGGTAAGGATAGCAGCTTGCACGGCGGCACCGTAG 4592 Query 7049 GCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGAT 7108 || || ||||| || ||||| || | | || ||| || || || || || Sbjct 4593 GCAACAGCCTCGTCAGGGTTGATGGACCTGTTGCACTCTCGGCCAGAGAAGTAGTCGGAG 4652 Query 7109 AACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACT 7168 | | | |||| || ||||| || || || ||||| ||||| ||||| || |||| Sbjct 4653 ACAAGCTTCTGAACCTTGGGGATACGGGTAGAACCACCAACCAAGACGATCTCGCTCACG 4712 Query 7169 TTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCAT---ACATTTA 7225 | || |||||||| ||||| || | || ||||| || ||||| | || Sbjct 4713 GATGCCTTGTCGATCTTCGAGTCACGCAAGACCTTCTCGACGGGGTCCATGGTAGAT--- 4769 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||| | ||| || || ||||| || ||||||||||| ||||| || ||||| || Sbjct 4770 CGGAAGAGGTCTTGGCAGAGCTCCTCGAATCGTGCACGGGTGATGGAAGTGTAGAAGTCG 4829 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 | |||||| | | || ||||| || || | || || || | ||||| | |||||| Sbjct 4830 ATACCGTCGAAGAGAGAGTCAATCTCGATCGAAGTCTGAGCGGCAGAAGACAGAGTTCGC 4889 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACG 7386 || || |||||||| || ||||| | ||||| || || || Sbjct 4890 TTGGCACGCTCACAAGCGGTTCGGAGTCGACGGAGAGCTCG 4930 Score = 93.3 bits (102), Expect = 5e-14 Identities = 141/200 (71%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 || ||||| | | ||| | |||||| ||| ||||||||| ||| | | |||| Sbjct 5526 ATGACCTTGAAAGGCCAGTGTTTCATGTCGGCTTGGACCTCGGCGTCTGCCCATTTTCGG 5585 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || |||||||| || || || || ||||| | |||||||||||| || ||||| Sbjct 5586 CCAATGAGACGCTTAGCGTCGAAGACGGTGTTGTGGGGGTTCATGGCGACCTGATTCTTG 5645 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || || || ||||| || | || | || |||||||| || || || ||| Sbjct 5646 GCGGCATCACCAATCAGACGCTC---GCTGTCGTTGAAAGCGACGTAGGAAGGAGTGGTT 5702 Query 8057 CGATTCCCTTGGTCGTTCGC 8076 || || || |||||||| || Sbjct 5703 CGGTTACCCTGGTCGTTTGC 5722 >seq130 Length=370431 Score = 145 bits (160), Expect = 1e-29 Identities = 277/400 (69%), Gaps = 16/400 (4%) Strand=Plus/Minus Query 7331 GAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGG 7390 || |||| || ||||| || ||||| || |||| ||| | ||| ||||||||||| ||| Sbjct 120722 GAGGATAGAGTACGCTTGGCACGCTCGCAAGCCGATCGAAGACGTCGAAGGGCACGAGGG 120663 Query 7391 TTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAGGAG 7449 | | || || || ||| || || || ||||| | |||||| |||| || Sbjct 120662 TCGTCAGAGATGTCGAGCTTGGCCTTTCGCTTGAACTCGGCCTTGAAGTGCTCGAGCAAG 120603 Query 7450 -TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAA 7508 | | | || || || ||||||||||| || || || || |||||||| ||||| | | Sbjct 120602 GTGTTG--TCAAAGTCCTCACCACCCAAATGGGTGTCACCGGCGGTCGCCTTGACGGCGA 120545 Query 7509 AGATACCT--CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAA 7566 ||| ||| || | ||| | ||| || ||||| || ||||||||||| || || || Sbjct 120544 AGA--CCTTGCCGTGGATGGAGAGCAAAGAGACATCGAAAGTACCACCACCAAGATCGAA 120487 Query 7567 AATGAGTACGTTCGTATCG-TCGTCTTTGTTCTTATCG---AGACCGTACGCGATAGCCG 7622 ||||| || || || ||||| ||| ||| ||| || ||||| ||||| |||| Sbjct 120486 GATGAGGACATTG----CGCTCGTCCTTGGACTTGTCGTCAAGTCCGTAAGCGATGGCCG 120431 Query 7623 CCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTT 7682 | || || || || || || ||||| | | || || |||||||||||| | || || | Sbjct 120430 CAGCAGTGGGCTCGTTGATGATACGCAAAACGTCGAGACCAGCAATAGTTCCGGCGTCCT 120371 Query 7683 TCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 | || || | ||||| || || || || || || || || Sbjct 120370 TGGTAGCAAGACGTTGGGAGTCATTGAAATAAGCGGGAAC 120331 Score = 91.5 bits (100), Expect = 2e-13 Identities = 183/270 (68%), Gaps = 6/270 (2%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| || ||||| | || ||||| || ||||| ||| || || |||| || Sbjct 161483 ATCGAAATCCTCCCCACCAAGATGAGTATCACCATTGGTCGATTTCACCTCGAAGACTCC 161542 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || || | | | || | |||||| ||||||||||| || || | | || | Sbjct 161543 CTTTTGCATTTCGAGGATTGAGATATCAAAAGTACCACCACCAAGATCGTACAC-AGCAA 161601 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || | || |||||| ||||| ||||| |||| || || || || ||||| Sbjct 161602 -----TGACGGCAGATTCGTTCTTGTCGAGGCCGTAGGCGAGGGCTGCAGCGGTGGGTTC 161656 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || | |||||| | || ||||| || | | ||||||||||| || || || Sbjct 161657 GTTGATTACTCGAAGAACCTCGAGACCAGCGATGGAACCAGCATCTTTCGTTGCCTGACG 161716 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGT 7725 ||| || ||||| || ||||| ||||| || Sbjct 161717 TTGAGAGTCGTTGAAATAGGCGGGGACGGT 161746 >seq1 Length=1646047 Score = 100 bits (110), Expect = 4e-16 Identities = 332/513 (65%), Gaps = 5/513 (1%) Strand=Plus/Plus Query 105463 TCGTATTTCTCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC 105522 ||||| ||||||| || |||||||||| |||| ||| |||||||| | Sbjct 679528 TCGTAGCTCTCGTACAGGCGCTCAAACTCTTCGCCGTGGCAGTCGGAAAGACCGGGGCAC 679587 Query 105523 TGATCAGGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCT 105582 | |||| || | || | ||||| ||| || ||||| || || |||||||| | |||| Sbjct 679588 TCTGCAGGGCACATTAAAGTCCAATCACCGTCAGATTCGACTCGCTTCATGAAAAGATCT 679647 Query 105583 GGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAA 105642 | ||||||| || | || |||||||| | ||||||| | || || ||| Sbjct 679648 GAGATCCACAGTGCGTAGAACAGGTCTCGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTG 679707 Query 105643 CGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAG-A 105701 |||| ||||| || || | | |||||| ||||| || || | || | |||| | | Sbjct 679708 CGAAGGTCGAGGAAGTCAAAGACATCGGCATGCCAAGGCTCGAGGTAAATGGCAAATGCA 679767 Query 105702 CCCTTTAC---GACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAA 105758 ||| | | ||| | |||||| ||| || | ||||| | | | |||| | Sbjct 679768 CCCGGTCGCTTGTTGCCAC-CTTGATCGACGTAACGAGCGGTGGCATCGAAGGCTCGGAG 679826 Query 105759 CATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACG 105818 ||| || | |||||| | ||| |||||||| || ||| | || ||||| || Sbjct 679827 CATGGGCACAATACCGTTGGAGTAGCCATTTGTACCGGCAATGTAAGAGCCCTTTGCCCG 679886 Query 105819 TACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTT 105878 | | ||| | ||| | || ||||| || || ||| ||| ||||| || Sbjct 679887 GATGTTGTGGATGTGGAGACCGATACCACCTGCGGTCTTGGAGATCTTGGCACAAGTCTT 679946 Query 105879 TACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGA 105938 | || ||||| ||||||||||| || |||| | || | ||||| || || || Sbjct 679947 GAGGGTCTCGTAGATACCGTCGATCGAGTCATCCTGCATTGCGACGAGGAAGCAGGACGA 680006 Query 105939 CATTTGTGGTCTGGGTGTACCAGCATTGAACAG 105971 |||||| || |||||||| || ||||| || Sbjct 680007 CATTTGAGGGTGAGGTGTACCGGCGTTGAAGAG 680039 Score = 84.2 bits (92), Expect = 3e-11 Identities = 126/176 (72%), Gaps = 6/176 (3%) Strand=Plus/Plus Query 104932 CCGTACATTTCGGCAAGTTCACACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAAT 104991 ||| || |||||| || || | ||| | |||||||| ||||||||||| || ||||| Sbjct 678955 CCGAACTCTTCGGCCAGCTCGCTCGAGGCTTCGAGTGCAGCGTGGTAGATGGTCTCGAAG 679014 Query 104992 ATATCAATGTTGAGTTTTCTCGATTCTTCTGAACCGAATGTCATTCTTAA---CATGATA 105048 || | |||||||| | || | || ||| |||| | ||| | || ||||| | Sbjct 679015 ATCTGGATGTTGAGCTCCCTGGCGGCTGGTGAGTCGAAAGGCATGCGCAATGCCATGA-A 679073 Query 105049 AACACGTCAGCGAGACCCTGAACACCAATACCGATGGGTCTGTGACGCATATTTGA 105104 | || || || |||||||| ||||| | || ||||||| ||||||||| || || Sbjct 679074 AGCA--TCTGCAAGACCCTGGACACCCAATCCTATGGGTCGGTGACGCATGTTGGA 679127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131601186840