Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq84 98.7 2e-15 >seq84 Length=171189 Score = 98.7 bits (108), Expect = 2e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 49845 CCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTT 49904 |||||||| | || || | ||| || |||||| ||||| ||||| ||||||| ||| Sbjct 164326 CCCTCGTCTCGCGAAATCAGTTCGTTTGAAAAAGTCAATCCAGGCATCAATCCTCGTTTT 164267 Query 49905 TTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCGACACACGCAAAT 49964 || ||||||||||| | |||||| | ||| ||||| || ||||||||||||||||| Sbjct 164266 TTCAGCCAAAATATGGCTGCAAATGACCCAGAGAAGAAAATGCCCTCGACACACGCAAAA 164207 Query 49965 GC 49966 || Sbjct 164206 GC 164205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984478095338850