Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq84 91.5 3e-13 >seq84 Length=171189 Score = 91.5 bits (100), Expect = 3e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 39136 CCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTA 39195 |||| ||| || ||||| | || || | ||| || |||||| ||||| ||||| | Sbjct 164337 CCGTGTGTGTCCCCTCGTCTCGCGAAATCAGTTCGTTTGAAAAAGTCAATCCAGGCATCA 164278 Query 39196 ATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCCA 39255 |||||| ||||| ||||||||||| | |||||| | ||| ||||| || ||||| | Sbjct 164277 ATCCTCGTTTTTTCAGCCAAAATATGGCTGCAAATGACCCAGAGAAGAAAATGCCCTCGA 164218 Query 39256 CACACGCAAATGC 39268 |||||||||| || Sbjct 164217 CACACGCAAAAGC 164205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905134291555800