Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq24 107 2e-18 >seq24 Length=290538 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || ||||| ||||| || || ||| | || Sbjct 53010 ATGCAAATCTTCGTAAAGACCCTTACCGGCAAGACTATCACGCTTGAGGTCGAATCGTCC 53069 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| |||||||| ||||| || || || || || ||||| Sbjct 53070 GATACCATTGACAACGTCAAAGCGAAGATCCAGGACAAGGAGGGTATCCCACCTGATCAG 53129 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| ||||| || ||||| || || ||| | || || || || Sbjct 53130 CAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAAGACGGCCGAACGCTCTCCGACTACAAT 53189 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||||||||| || ||| | || | |||||||| || || Sbjct 53190 ATCCAGAAGGAATCGACTCTCCACCTTGTCCTTCGATTGCGAGGTGG 53236 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || ||||| || || || || || || || || | || Sbjct 52735 ATGCAGATCTTCGTCAAAACCCTTACCGGCAAGACCATCACCCTTGAGGTTGAGTCGTCC 52794 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || |||||||||||| Sbjct 52795 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAA 52854 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || || |||||||| ||||| || || || ||||| Sbjct 52855 CAGCGATTGATCTTCGCCGGCAAGCAACTTGAGGA 52889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896750818280