Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq24 82.4 6e-11 >seq24 Length=290538 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || ||||| ||||| || | ||||||| || ||||| || ||||||||||| ||| Sbjct 52889 TCCTCAAGTTGCTTGCCGGCGAAGATCAATCGCTGTTGATCGGGAGGAATACCCTCCTTG 52830 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || ||||| | || | ||||| || || || ||||| || || Sbjct 52829 TCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGACGACTCAACCTCAAGGGTGATG 52770 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | |||||| || || |||||||| Sbjct 52769 GTCTTGCCGGTAAGGGTTTTGACGAAGATCTGCAT 52735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218491076291