Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20]
151 sequences; 19,786,307 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq50 122 7e-22
>seq50
Length=5760
Score = 122 bits (134), Expect = 7e-22
Identities = 223/325 (69%), Gaps = 10/325 (3%)
Strand=Plus/Plus
Query 282152 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 282211
|||| |||||| || | |||| | | || || || || ||||| || ||||| |||
Sbjct 5014 TTTCGCTTGAACTCCTGAACAAAGTGGTTGACGAGTCGGTTGTCAAAGTCCTCACCACCC 5073
Query 282212 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 282271
|| | ||| | |||| || || | || | ||| | || || || | | |||||||
Sbjct 5074 AAGTGAGTGTCACCTGCAGTGGCCTTGACCTCGAAGATACCCTCATCGATGGTCAAAAGA 5133
Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT-----TTGT 282326
| ||||| ||| ||||| |||| || || || || || || || || ||||
Sbjct 5134 GACACATCGAAGGTACCACCTCCCAAGTCGAAGATGAGGACGTT--TTGCTCGCCCTTGT 5191
Query 282327 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 282386
||| | || || ||||| || || | || || ||||| ||||| ||||| || | |
Sbjct 5192 CTT---TCTTGTCGAGACCGTATGCGATGGCGGCGGCAGTGGGTTCGTTAATGATACGGA 5248
Query 282387 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAA 282446
|| | |||||||||||| ||||||| || || || ||||| | || || ||||| |
Sbjct 5249 GGACGTCAAGACCAGCAATGGTTCCTGCGTCCTTGGTTGCTTGACGCTGAGAGTCGTTGA 5308
Query 282447 AATATGCAGGAACAGTAATAACGGC 282471
| || || |||||||| | ||||||
Sbjct 5309 AGTAGGCGGGAACAGTGACAACGGC 5333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740622986538126
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |