Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq77 95.1 3e-14 >seq77 Length=196091 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 ||| || ||||| || ||||| ||||| ||||| ||||||| ||| ||||| | ||| || Sbjct 17694 TCGCAGCCTCAAGACGAGGTGGAGAGTGGACTCCTTCTGGATATTGTAGTCGGACAAGGT 17753 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||||| || |||||||| ||||||||||| || || ||||| Sbjct 17754 ACGACCATCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTG 17798 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206191 CTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAG 206250 || || || || |||||||| | || || || || ||||| |||| || ||| Sbjct 17894 CTTACGGGTAAGACGATCACCCTTGAGGTCGAGTCCTCGGACACGATCGACAATGTCAAG 17835 Query 206251 CAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGA 206310 ||||| || || || || || || || ||| || |||| ||||||||||| Sbjct 17834 TCCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAACAGCGACTCATCTTCGCCGGC 17775 Query 206311 AAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTT 206370 |||||| | || ||||| | || ||| |||| ||||| ||||||| ||||| ||||| Sbjct 17774 AAGCAGCTCGAGGATGGTCGTACCTTGTCCGACTACAATATCCAGAAGGAGTCCACTCTC 17715 Query 206371 CACCTTGTTTTGAGACTTCGA 206391 ||||| || ||||| || ||| Sbjct 17714 CACCTCGTCTTGAGGCTGCGA 17694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181818513546071