Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq24 82.4 5e-11 >seq24 Length=290538 Score = 82.4 bits (90), Expect = 5e-11 Identities = 126/177 (71%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 34531 TAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGG 34590 || || ||||| ||||| |||| |||||||| || ||||| || || || |||||||| Sbjct 52910 TAGTCGGAAAGGGTTCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAATCGCTGTTGA 52851 Query 34591 TCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTC 34649 || || || | ||||||||||| |||| || | || ||| | ||| ||||| Sbjct 52850 TCGGGAGGAATACCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCAATGGTGTCGGA 52792 Query 34650 GCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| || || | ||| || || || ||||| | ||||| || || |||||||| Sbjct 52791 CGACTCAACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACGAAGATCTGCAT 52735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729020799183