Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq24 118 9e-22 >seq24 Length=290538 Score = 118 bits (130), Expect = 9e-22 Identities = 133/178 (75%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || ||||||||| | || || ||||| || || ||||| Sbjct 52735 ATGCAGATCTTCGTCAAAACCCTTACCGGCAAGACCATCACCCTTGAGGTTGAGTCGTCC 52794 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || || ||||| || || || || ||||||||| Sbjct 52795 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAA 52854 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 ||||| || || | ||||||||| ||| | || ||| | ||| ||||||| |||| Sbjct 52855 CAGCGATTGATCTTCGCCGGCAAGCAACTTGAGGACGGCCGAACCCTTTCCGACTACA 52912 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 27083 CAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 || ||| || || |||||||| ||||||||| | || | |||||| || ||||| || || Sbjct 53382 CAGAGAGGGTATCCCACCCGACCAACAGCGTCTGATTTTCGCCGGAAAGCAATTAGAGGA 53441 Query 27143 CAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 | ||| | || || ||||||||||| || ||||| ||||| || | || ||||| Sbjct 53442 TGGCCGAACCCTGTCTGACTACAACATTCAGAAAGAGTCCACCTTGCACCTCGTCTTGCG 53501 Query 27203 TTTGCGGGGTGGCAT 27217 | | || ||||| || Sbjct 53502 TCTCCGTGGTGGTAT 53516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917579091520