Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20]
151 sequences; 19,786,307 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq24 109 5e-19
>seq24
Length=290538
Score = 109 bits (120), Expect = 5e-19
Identities = 143/193 (74%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153
|| || || ||||| || |||| || ||||| |||| |||||||| ||||| || ||
Sbjct 53200 TCCTTCTGGATATTGTAGTCGGAGAGCGTTCGGCCGTCTTCAAGCTGCTTGCCGGCGAAG 53141
Query 39154 ATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212
|| ||||||||||| || |||||| | | ||| |||||| ||| ||| ||||| |||
Sbjct 53140 ATGAGACGCTGCTGATCAGGTGGG-ATACCCTCCTTGTCCTGGATCTTCGCTTTGA-CGT 53083
Query 39213 CGCCACCG-TATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271
| || | ||||| ||| || || || | ||||||| | || || || || || || |
Sbjct 53082 TGTCAATGGTATCGGACGATTCGACCTCAAGCGTGATAGTCTTGCCGGTAAGGGTCTTTA 53023
Query 39272 CAAAGATTTGCAT 39284
| |||||||||||
Sbjct 53022 CGAAGATTTGCAT 53010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429544809501863
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |