Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq24 89.7 3e-13 >seq24 Length=290538 Score = 89.7 bits (98), Expect = 3e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| |||||||| || || || || ||||| || || ||||| || | Sbjct 52735 ATGCAGATCTTCGTCAAAACCCTTACCGGCAAGACCATCACCCTTGAGGTTGAGTCGTCC 52794 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| || ||| | || || |||||| Sbjct 52795 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATTCCTCCCGATCAA 52854 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACG 23767 ||||| || || || |||||||| ||||| || |||| Sbjct 52855 CAGCGATTGATCTTCGCCGGCAAGCAACTTGAGGACG 52891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008977956708