Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq84 111 2e-19 seq24 91.5 2e-13 >seq84 Length=171189 Score = 111 bits (122), Expect = 2e-19 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 23544 AATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATAT 23603 ||||| ||| || ||||| || ||||| ||||| |||||||||||||| | ||||||||| Sbjct 164312 AATCAGTTCGTTTGAAAAAGTCAATCCAGGCATCAATCCTCGTTTTTTCAGCCAAAATAT 164253 Query 23604 TGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCAC 23654 || |||||||| || || |||||||| ||||| ||| |||||| || || Sbjct 164252 GGCTGCAAATGACCCAGAGAAGAAAATGCCCTCGACACACGCAAAAGCGAC 164202 >seq24 Length=290538 Score = 91.5 bits (100), Expect = 2e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 23551 TCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCA 23610 || || || ||||| | || ||||| | ||||||||| || | ||| || || | ||| Sbjct 19131 TCGTTTGAGAATGTAAGACCGGGCATGAGTCCTCGTTTCTTGAGCCAGAAGATGGACGCA 19072 Query 23611 AATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAAT 23670 |||||||| |||||||| |||||||| ||||| |||||||| | | || | ||||| Sbjct 19071 AATGATCCTGAAAAGAAGATACCCTCTACAGCGGCAAAGGCGATCAATCGCTCAGCAAAT 19012 Query 23671 GTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTC 23715 || | | ||||| ||||| || || ||| || |||||| Sbjct 19011 GTGGATCGTTGGTCAGAGATCCACTTGAGTGCCCAGTTGGCCTTC 18967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487015691400