Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naematelia_20encephala_20[genbank_20GCA_5F002105065.1_202017-04-20] 151 sequences; 19,786,307 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq24 141 7e-29 >seq24 Length=290538 Score = 141 bits (156), Expect = 7e-29 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||| || || | || ||||| || || ||||| ||||| ||||| || Sbjct 53240 CATACCACCTCGCAATCGAAGGACAAGGTGGAGAGTCGATTCCTTCTGGATATTGTAGTC 53181 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| || |||| || |||||||| ||||| ||||| | |||||||||||| | Sbjct 53180 GGAGAGCGTTCGGCCGTCTTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGG 53121 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | ||| ||||| ||| |||||| |||| | ||| | ||||| |||| |||| Sbjct 53120 TGGGATACCCTCCTTGTCCTGGATCTTC-GCTTTGACGTTGTCAATGGTATCGGACGATT 53062 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| | ||| || ||||| || || |||||||| |||||||||||||| Sbjct 53061 CGACCTCAAGCGTGATAGTCTTGCCGGTAAGGGTCTTTACGAAGATTTGCAT 53010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989737505167