Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq118 95.1 3e-14 >seq118 Length=311515 Score = 95.1 bits (104), Expect = 3e-14 Identities = 243/363 (67%), Gaps = 14/363 (4%) Strand=Plus/Minus Query 281819 GTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGA--AGC 281876 ||| ||||||||||| ||||| | | ||| || || ||| |||||| ||| ||| Sbjct 30906 GTTGATGTTATTGCTGCCGACAAAGTTCTGGGCGAGACCGACAATTGTCA--TGACCAGC 30849 Query 281877 GATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCACTGAACTGTGCTACC 281936 ||| |||||||| || || || | | ||| | || ||||| | || || ||| Sbjct 30848 GATTGTTCACCGTGATGGTAAGCCGTCTTTTCAGACACGTAACCCGCAAGTTGGGCGACC 30789 Query 281937 TTCACGTCTGATGTCAAG-TTGCGTTTGAAAGCGCAATATAATACTTTTCGTTGAGAAGG 281995 || | || || | || || ||||||||| | | | || || ||||||||| ||| Sbjct 30788 TTGATTTCCT-TGACGAGCTTTCGTTTGAAACAACCAAACAAGACCTTTCGTTGACCAGG 30730 Query 281996 CTTGAAACCATCAACGACAGACGGAATGCTGCGTTCCAGGTCATACCGC----GAGAACA 282051 ||| || ||||| ||||||| || || || | || || |||| ||||||| Sbjct 30729 CTTCAACCCATCCGCGACAGAGGGGATTGATCGG---ATGTTAT-CCGCCATCGAGAACA 30674 Query 282052 AAATAAGTTCCTTGTCAATGAAGTCGGGAACGGGAACCTCGGGCTTCTTGTGGTCAAGTT 282111 || | |||||||| || ||||||| || || |||||| | | ||| || || | Sbjct 30673 GGATTAATTCCTTGTTGATAAAGTCGGAAATCGGGACCTCGTCGATGTCGTGATCGAGGT 30614 Query 282112 GGTTTCCCGGCTCGTATGCCGTCATCCACTCCTTGCGATCCTCGGCCCGAGTCTTGTTGA 282171 | | || |||| | || | | | |||||| || || || || ||| ||||||||| Sbjct 30613 AGGTACCAGGCTTGAATTGCCTAAGCCACTCTTTACGGTCGTCAGCCTTTTTCTTGTTGA 30554 Query 282172 AAG 282174 ||| Sbjct 30553 AAG 30551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057819432514310