Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq129 116 8e-21 >seq129 Length=301134 Score = 116 bits (128), Expect = 8e-21 Identities = 269/400 (67%), Gaps = 9/400 (2%) Strand=Plus/Plus Query 248832 TTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAAT 248891 |||||| || || ||| ||| || || || ||| || |||| |||| |||||| Sbjct 25776 TTTCAAGACCCTCGAGCGATCATACCTTCTTCGAATCGACGGCAGAATCGCCGAACGACC 25835 Query 248892 TCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCT 248951 |||||||||| | |||||||| || ||||| || ||| ||| | || | || | Sbjct 25836 TCAGCACATGATCATGCGAGTCGCCGTCGGTATCCACGGCCGAGACGTCGAAAAGGTTAT 25895 Query 248952 CGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAA 249011 ||||| || | | ||| || || | | || || ||| | ||||| | ||||| Sbjct 25896 TGAGACATATAACCTCATGTCCGAGCGATACTTTACCCACGCCTCGCCGACCTTGTTCAA 25955 Query 249012 CGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACT 249070 ||||||||| | ||| | |||| || |||||||| | | || ||| | ||||||| Sbjct 25956 CGCCGGTACGCCTCACCC-TCAGTTGTCTTCGTGCTTCTTGGTCGCAATGAAGGACGACT 26014 Query 249071 CTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGATTTCTAAATTCGCGG 249127 | | || || || || ||||| || || ||| || | ||| || ||| |||| Sbjct 26015 CGATTGAGGGAATCTACGACACCCTCAA---GACTTGTGCCATGATCTCCAAAACTGCGG 26071 Query 249128 GCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAA 249187 |||| || || | | | |||||||||||| ||||| |||||||| || || | Sbjct 26072 GCGGTATTGGATTGAACATTCACAACATCCGAGCCAAGGGATCGTACATTGCCGGAACCA 26131 Query 249188 ATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTT 249227 | ||| | |||||||||| ||| | |||||| |||| Sbjct 26132 ACGGGTACTCGAATGGTATCGTCCCCATGCTTCGA-GCTT 26170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073761763678016