Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq129 141 2e-28 >seq129 Length=301134 Score = 141 bits (156), Expect = 2e-28 Identities = 295/436 (68%), Gaps = 4/436 (1%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | ||||| | ||| ||| ||||| ||| ||| | || || | ||| Sbjct 25771 TTCGGTTTCAAGACCCTCGAGCGATCATACCTTCTTCGAATCGACGGCAGAATCGCCGAA 25830 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 || || ||||| ||| | ||||| || || | |||||||| ||| || || || Sbjct 25831 CGACCTCAGCACATGATCATGCGAGTCGCCGTCGGTATCCACGGCCGAGACGTCGAAAAG 25890 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCCAACAA 363568 | ||||| |||||||| || | || | | | || || || |||||| |||| || Sbjct 25891 GTTATTGAGACATATAACCTCAT--GTCCGAGCGATACTTTACCCACGCCTCGCCGACCT 25948 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 ||| ||| || || || | | | || ||| ||||||| ||||| | | |||||||| Sbjct 25949 TGTTCAACGCCGGTACGCCTCACCCTCAGTTGTCTTCGTGCTTCTTGGTCGCAATGAAGG 26008 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 |||| || || ||||| |||| ||||| || |||| |||||| | || ||||| | || Sbjct 26009 ACGACTCGATTGAGGGAATCTACGACACCCTCAAGACTTGTGCCATGATCTCCAAAACTG 26068 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCA 363748 | ||||| ||||| | || ||||| | || || || |||||| ||| | Sbjct 26069 CGGGCGGTATTGGATTGAACATTCACAACATCCGAGCCAAGGGATCGTACATTGCCGGAA 26128 Query 363749 CAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGT 363808 | || ||||||||||| | || ||||||||||| | | || ||||| | | Sbjct 26129 CCAACGGGTACTCGAATGGTATCGTCCCCATGCTTCGAGCTTACGATGCGACTGCTCGAT 26188 Query 363809 ACGTCGACCAGGGTGG 363824 ||||||||||||| || Sbjct 26189 ACGTCGACCAGGGAGG 26204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303347972363534