Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq24 87.8 2e-12 >seq24 Length=437227 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 20413 CGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCAC 20472 ||| ||||| || | ||||||||| | ||||| ||| || || || || || | Sbjct 155420 CGGATTCCATGCGCTCATAATGATCCGCCTATCCGTCGGGTTGTTCTTGATCTTGTCAAT 155361 Query 20473 AATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATC-CGCGTCCACGTACG 20531 | | || || || || | ||||| || ||||| ||| | || | |||| |||| Sbjct 155360 CACTTGCGCCAGCTGATCGACGCCCTGTCCCGTATAATCATCCTCGCACGTCTT-GTACT 155302 Query 20532 CCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGT 20591 | || || || ||||||||||| || || || || |||||||| || || ||||||| || Sbjct 155301 CGGCGCCGAAATGCCTCCACTGAAATCCATAGACCGGTCCCAAGTCACCTTCCCTTCGGT 155242 Query 20592 GCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATAT 20643 | |||| ||| | | | ||| ||||||| || || ||| | |||| || Sbjct 155241 GTCCCAGTCCGACCTTGTCGAGGTACTCCCTTGATCCGTTTCCGGCCCAGAT 155190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441370940717080