Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq129 116 4e-21 >seq129 Length=301134 Score = 116 bits (128), Expect = 4e-21 Identities = 148/203 (73%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 94176 TTCTTTCGCGG--TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTG 94233 ||||||||| | |||| ||||| |||||||||||||| || | |||||||| || Sbjct 26272 TTCTTTCGCAGCATCTACCTCGAACCCTGGCACGCGGATGTCTTCGACTTCATCGATCTT 26331 Query 94234 CGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTG 94293 ||||||||||||||||| || | | ||| ||||||| |||||||| |||||| | Sbjct 26332 CGAAAGAACCACGGCAAGGAAGAAGTCCGAGCCCGAGACCTGTTCTACGCGCTCTGGATC 26391 Query 94294 CCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAAT 94353 || ||| | || ||| ||| |||||| || || |||| | | || ||||| Sbjct 26392 CCCGACATGTTCATGCGACGTGTCGAGGCGGACGGCGACTGGGCGTTGATGTGCCCCAAC 26451 Query 94354 GAATGTCCCGGACTGTCCGACGT 94376 || ||||| || |||||||| || Sbjct 26452 GAGTGTCCGGGTCTGTCCGAAGT 26474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721115978520