Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq107 113 4e-20 seq129 89.7 5e-13 >seq107 Length=1016152 Score = 113 bits (124), Expect = 4e-20 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || ||||| || |||||||| || || | ||||| || || || ||||||||||| | Sbjct 89364 CCACCTCGCAATCGCAAAACCAAGTGCAGGGTAGACTCCTTCTGAATGTTGTAATCCGAC 89305 Query 137245 ATTGTGCTCGA--GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 137302 | || |||| ||| || | || || || || |||||| |||||||||||||| | Sbjct 89304 AAGGT--TCGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCGTTGCTGATCGGGCG 89247 Query 137303 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTA 137362 | |||||||| ||||| ||| || || | | || | ||||| | || || | Sbjct 89246 GGATGCCTTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCCGAGGACTCGA 89187 Query 137363 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 |||||| || | |||||| |||||||| || || || || ||||||||| Sbjct 89186 CTTCAAGGGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATTTGCATA 89137 >seq129 Length=301134 Score = 89.7 bits (98), Expect = 5e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 150395 GCCGGAAGTGTGCGAAAATAGTACATGCCGGTTTTGAGGCCGCGCTTCCAACCGTACATG 150454 ||||| | || || || |||||||||||||| ||||| || |||||||||||| | | Sbjct 27725 GCCGGTCGGGTTCGCAAGTAGTACATGCCGGTCTTGAGTCCTTTCTTCCAACCGTAGAAG 27666 Query 150455 TGCACCGACGCCATTTTAGGCAAAGTAGGGTTTGCCATGTACACGTTGAACGATTGACTT 150514 |||| ||||| | | | || | |||||| | ||||| | |||| ||||| | Sbjct 27665 TGCATCGACGTGAGCTGACCCATCGAAGGGTTGGTCATGTGGATATTGAGGGATTGCGAT 27606 Query 150515 TGATCGATAAATGCTCCCCTGTCTGCTGCCATTTCAATCATA 150556 ||||||||||| ||||| | ||| || || | || || ||| Sbjct 27605 TGATCGATAAAGGCTCCTCGGTCGGCAGCGAGATCGATGATA 27564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488541942008400