Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq107 120 2e-22 >seq107 Length=1016152 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| ||| || || ||||| || || || ||| || || ||||||||||| || Sbjct 89365 ACCACCTCGCAATCGCAAAACCAAGTGCAGGGTAGACTCCTTCTGAATGTTGTAATCCGA 89306 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || |||| ||||| || |||||||| || ||||| || |||||||| |||| Sbjct 89305 CAAGGTTCGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCGTTGCTGATCGGGCGG 89246 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| ||| || | | || | ||| | ||||| || || | Sbjct 89245 GATGCCTTCCTTGTCCTGAATCTT-GGACTTGACGTTGTCGATAGTGTCCGAGGACTCGA 89187 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| |||||||| || || || ||||| || |||||||| |||||| Sbjct 89186 CTTCAAGGGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATTTGCATA 89137 Score = 98.7 bits (108), Expect = 7e-16 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| || ||||| ||| ||||| |||||||| |||||||| || || |||| ||| Sbjct 88890 ACCAGGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGTTCGGCCGTCTTCC 88831 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || || ||||| ||||| |||||||| || | || | || || ||||| | Sbjct 88830 AGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCAGGAGGAATCCCCTCCTTGTCCTGA 88771 Query 33661 ATTTT-CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || || || |||| ||| | || || || || || || || | ||||| || | Sbjct 88770 ATCTTGCTCTTG--ACATTGTCGATTGTATCACTCGACTCGACTTCCAAGGTGATTGTCT 88713 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || || || || |||||||||||| Sbjct 88712 TTCCGGTCAAGGTCTTGACGAAGATCTGCATA 88681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702649951040