Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq190 96.9 3e-15 >seq190 Length=239985 Score = 96.9 bits (106), Expect = 3e-15 Identities = 232/348 (67%), Gaps = 5/348 (1%) Strand=Plus/Minus Query 46914 ATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGAC 46973 |||||||| ||||||||| ||||| | ||||| || ||||| ||||| ||||| ||| Sbjct 13015 ATGCCGGGACTGACGTTCTCCAACGAACTCATCTCCCGAGACGAGGGACTCCACACCGAC 12956 Query 46974 TTTGCGTGTCTCTATTACAAGACGCGCGTGAATGAGAAATTAAACTCGGACACGATCCTG 47033 ||||| || ||| | || | | | |||| | || |||| || | Sbjct 12955 TTTGCATGCCTCCTCTTCA---CCCACCTGAAACGACGACCGCACCCGGAAACCGTGGAA 12899 Query 47034 AGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTC 47093 |||| | | || || || | ||||| || || | || | || ||||| ||| Sbjct 12898 CGCATCATCCGTGAAGCCGTCGACCTCGAATGTGAATTCCTGACGGACGCCCTGCCGGTC 12839 Query 47094 GCCTTGCTGGGCATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGT 47153 | ||| | |||||||||| | || |||||| | || ||| ||| || || |||||| Sbjct 12838 TCATTGATCGGCATGAACGAAAAGCTCATGTGCCAGTACATTCGGTTCGTCGCCGATCGT 12779 Query 47154 CTGTTGGTGCAGCTCGGACAACCGAAATATTTT-AATGCTCGTAATCCGTTTGAGTTTAT 47212 ||| | || || ||| ||| || | | || | | || ||||| || ||||| Sbjct 12778 CTGCTCGTCGCCCTTGGA-AACGACAAGGTGTACAACGATACCAACCCGTTCGACTTTAT 12720 Query 47213 GAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGT 47260 | | |||||||||||| |||| ||| |||| ||||||||| ||| || Sbjct 12719 GGAAAACATTTCGCTCCAGGGTAAAGCCAACTTTTTCGAGTCACGCGT 12672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609192275320