Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq107 93.3 4e-14 >seq107 Length=1016152 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| || || || |||||||| ||||||| | |||||||| || Sbjct 89138 ATGCAAATCTTTGTGAAGACGTTGACCGGAAAGACGATCACCCTTGAAGTCGAGTCCTCG 89197 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || |||||||| | || || || ||| || || || || || |||||||||||| Sbjct 89198 GACACTATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAAGGCATCCCGCCCGATCAG 89257 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGATTACA 25352 ||| | | || | || ||| || || | || || | | ||| |||| ||||||| Sbjct 89258 CAACGGTTGATCTTCGCCGGAAAGCAGTTGGAGGACGGTCGAACCTTGTC--GGATTACA 89315 Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 | ||||| || || || ||| | || || || || ||||| |||| || Sbjct 89316 ACATTCAGAAGGAGTCTACCCTGCACTTGGTTTTGCGATTGCGAGGTGG 89364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445092525039840