Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq107 100 2e-16 >seq107 Length=1016152 Score = 100 bits (110), Expect = 2e-16 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 |||| || ||||| ||||||||||||||| || || || || ||||| ||||||| Sbjct 88890 ACCAGGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGTTCGGCCGTCTTCC 88831 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || || ||||| || || ||||| ||||| || || | ||||||||||| || Sbjct 88830 AGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCAGGAGGAATCCCCTCCTTGTC-CTG 88772 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCGTTT 34675 | || | || || | ||||| || ||| ||| ||||||| ||| || || | Sbjct 88771 AATCTTGCTCTTGACATTGTCGATTGTATCACTCG-ACTCGACTTCCAAGGTGATTGTCT 88713 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||| || || || || || |||||||| Sbjct 88712 TTCCGGTCAAGGTCTTGACGAAGATCTGCAT 88682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728307346521