Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001468955.1_202015-12-17] 337 sequences; 20,877,543 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq107 89.7 4e-13 >seq107 Length=1016152 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| ||||| || || || |||| || ||||| |||| || ||||| ||||| ||||| Sbjct 88873 CTCCTTTTGAATGTTGTAGTCGGAGAGAGTTCGGCCGTCTTCCAGCTGCTTGCCAGCAAA 88814 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || | ||||||||||| | || | | ||| |||||| || || |||| | Sbjct 88813 GATCAATCGCTGCTGGTCAGGAGGAATCCCCTCCTTGTCCTGAATCTTGCTCTTGACATT 88754 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | ||||| |||||||| || |||| ||||| | ||||| |||| || || || Sbjct 88753 GTCGATTGTATCACTCGACTCGACTTCCAAGGTGATTGTCTTTCCGGTCAAGGTCTTGAC 88694 Query 39273 AAAGATTTGCAT 39284 ||||| ||||| Sbjct 88693 GAAGATCTGCAT 88682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429543835775681