Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001599735.1_202016-03-01] 74 sequences; 20,697,359 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq22 116 8e-21 >seq22 Length=364263 Score = 116 bits (128), Expect = 8e-21 Identities = 269/400 (67%), Gaps = 9/400 (2%) Strand=Plus/Plus Query 248832 TTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAAT 248891 |||||| || || ||| ||| || || || ||| || |||| |||| |||||| Sbjct 67035 TTTCAAGACCCTCGAGCGATCATACCTTCTTCGAATCGACGGCAGAATCGCCGAACGACC 67094 Query 248892 TCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCT 248951 |||||||||| | |||||||| || ||||| || ||| ||| | || | || | Sbjct 67095 TCAGCACATGATCATGCGAGTCGCCGTCGGTATCCACGGCCGAGACGTCGAAAAGGTTAT 67154 Query 248952 CGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAA 249011 ||||| || | | ||| || || | | || || ||| | ||||| | ||||| Sbjct 67155 TGAGACATATAACCTCATGTCCGAGCGATACTTTACCCACGCCTCGCCGACCTTGTTCAA 67214 Query 249012 CGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACT 249070 ||||||||| | ||| | |||| || |||||||| | | || ||| | ||||||| Sbjct 67215 CGCCGGTACGCCTCACCC-TCAGTTGTCTTCGTGCTTCTTGGTCGCAATGAAGGACGACT 67273 Query 249071 CTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGATTTCTAAATTCGCGG 249127 | | || || || || ||||| || || ||| || | ||| || ||| |||| Sbjct 67274 CGATTGAGGGAATCTACGACACCCTCAA---GACTTGTGCCATGATCTCCAAAACTGCGG 67330 Query 249128 GCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAA 249187 |||| || || | | | |||||||||||| ||||| |||||||| || || | Sbjct 67331 GCGGTATTGGATTGAACATTCACAACATCCGAGCCAAGGGATCGTACATTGCCGGAACCA 67390 Query 249188 ATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTT 249227 | ||| | |||||||||| ||| | |||||| |||| Sbjct 67391 ACGGGTACTCGAATGGTATCGTCCCCATGCTTCGA-GCTT 67429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765381935232