Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001599735.1_202016-03-01] 74 sequences; 20,697,359 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 3e-14 >seq2 Length=1446810 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| |||| || |||| |||| || || || ||||||||||||||||||||| | Sbjct 440685 ACCACCTCGCAATCGCAAAACCAAGTGCAGGGTAGACTCCTTCTGAATGTTGTAATCCGA 440626 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 ||| ||| |||| ||||| ||||| ||||| || |||| || ||||| || ||| Sbjct 440625 CAAGGTTCGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCGTTGCTGGTCGGGCGG 440566 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTT--AATGGAACTC-ACACTATCAGTAGATTC 34076 | || || |||||| ||| || ||| || | || | | | || | || || Sbjct 440565 GATGCCTTCCTTGTCCTGAATCTTGGACTTGACATTG---TCGATAGTGTCCGAGGACTC 440509 Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | ||| | || || || |||||||| | || ||||||||||||||||| Sbjct 440508 GACTTCAAGGGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATTTGCAT 440458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397062041899348