Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001599735.1_202016-03-01] 74 sequences; 20,697,359 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq22 145 1e-29 >seq22 Length=364263 Score = 145 bits (160), Expect = 1e-29 Identities = 455/696 (65%), Gaps = 38/696 (5%) Strand=Plus/Minus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 || |||||||||| || || | ||||| || | | ||| || ||||||||||||||| Sbjct 69011 TCGACCGTGAACTTGATAGCATCGACGGCCGGTCGGGTTCGCAAGTAGTACATGCCGGTC 68952 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962 || || || |||| ||| ||||| | |||||| || | || | | || |||| | Sbjct 68951 TTGAGTCCTTTCTTCCAACCGTAGAAGTGCATCGACGTGAGCTGACCCATCGAAGGGTTG 68892 Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCAT 204021 | |||||| || || || || || ||| ||||| |||||| || || || || || | Sbjct 68891 GTCATGTGGATATTGAGGGATTGCGATTGATCGAT-AAAGGCTCCTCGGTCGGCAGCGAG 68833 Query 204022 ATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAA---------CACGTCT-C 204071 || ||| || |||||| || ||||| || |||||| | || ||| | Sbjct 68832 ATCGATGATACCCTTCTGGCTGATTTCCCAAACAGTCTTGTAGATAGCCTTCAACTCTGC 68773 Query 204072 TGGTGTGTTGAGGCACATCTTCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAGTCTCA 204131 || ||||| || | | || ||| ||||| || || || | || Sbjct 68772 AGGAATGTTG-GGAATGTTTT---------GGATGGAGCCACCGTGTGCGATGATTCGGT 68723 Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGA 204191 || || |||| || |||| | |||| ||| || || |||| || |||| || Sbjct 68722 TCTTCATCTCGTCGTCCCAGAGACCCAGGTTGACCAAGTCACGCAACAACCAGGGGCAGA 68663 Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251 || ||| || || |||| ||||| | ||||| | | | |||| ||||| | ||||||| Sbjct 68662 CGACCTGGAAATCACCGGCGAGCACACGTCGGGAGTAAATGTTGCTGGTGTACGGTTCGA 68603 Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311 | ||||| ||| | ||| || | |||| || || ||||||||||| | || | Sbjct 68602 AACATTCGTTCCAGCCCAGAATTTGTGAGGTGGATGCAGTCGGCATGGGAGCGACCAGGA 68543 Query 204312 GGGAGTTGCGCACACCGTATTTTTG--GACCCTGCGCTTCAGAGAGGTCCAGTC---GTG 204366 | |||||||| | || | | ||| || | || ||||| | | ||| || | | Sbjct 68542 GCGAGTTGCGTAGGCC--AGTCTTGGCGATCTTGGCCTTCAAGGTTGCCCAATCCCAGAG 68485 Query 204367 CATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCT 204426 || || ||| | | |||||| | |||| |||| || ||||||||||| | ||| Sbjct 68484 GGGCG-ACGGGG--TAATGCCCCAAAGGTCGTACTGCAACTTGCCTTGACTGGCCGGGGA 68428 Query 204427 GCCCTTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCT---TGCACGAGGCGGCCAT 204483 ||| | ||| ||| | ||||| ||| ||||||||| || |||| || | Sbjct 68427 GCCTTCGTAGGTCTGGTAAGGGCCCTCCACTTCTGCCATCTCAGAAGACGACTCGAGCGC 68368 Query 204484 GGCGTGATAGTACATGGTCTCAAAGATCTGAACGTT 204519 |||||| ||| ||||| ||||| || || ||||| Sbjct 68367 GGCGTG---GTAGATGGTTTCAAAAATTTGCACGTT 68335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154464481440