Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001599735.1_202016-03-01] 74 sequences; 20,697,359 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq18 113 4e-20 >seq18 Length=491663 Score = 113 bits (124), Expect = 4e-20 Identities = 242/356 (68%), Gaps = 7/356 (2%) Strand=Plus/Minus Query 30041 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 30100 |||| || ||||| |||| || ||||| ||||| || ||||||||| |||| || Sbjct 181932 CTTTCGGATTCCATGCGCTCATAATGATCCGCCTATCCGTCGGGTTGTTCTTGATCTTGT 181873 Query 30101 CCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTG 30159 | | | | ||||||||| || ||| |||| || || || | || ||| || Sbjct 181872 CAATCACTTGCGCCAGCTGATCGACGCCCTGTCCCGTATAATCATCCTCGCACGTCT-TG 181814 Query 30160 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30219 ||||| || ||||||||||||||||| || || || |||||||||| ||| ||||| Sbjct 181813 TACTCGGCGCCGAAATGCCTCCACTGAAATCCATAGACCGGTCCCAAGTCACCCTCCCTT 181754 Query 30220 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30279 | ||| | | || |||||| | | || || || ||||| || ||||||| | Sbjct 181753 CGGTGTCCCAGTCCGACCTTGTCGAGGTACTCCCTTGATCCGTTTCCGGCCCAGATATGA 181694 Query 30280 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 30339 | |||| || | ||| || || || || || | ||||||||| || ||||| Sbjct 181693 ATATCCTTTTCCGCGAGAAGCTTTCCGTCGGTCGAGCCGCGGACGAACCAGAGTAGCTCT 181634 Query 30340 TCCACGACGGCCTTCCAA--AAGACCCTCTTGGTCGTGAGGAGGGGAAACTGTCCC 30393 || |||||| | | || ||||| | || || || ||||| || ||| ||||| Sbjct 181633 TCGACGACG--CCGCGAAGGAAGACTCGTTTCGTAGTTAGGAGCGGTAAC-GTCCC 181581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617231478002