Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001599735.1_202016-03-01] 74 sequences; 20,697,359 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2 104 2e-17 >seq2 Length=1446810 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 ||||| ||||| || || || ||| || ||||| |||||||| || | ||||| || Sbjct 440672 CGCAAAACCAAGTGCAGGGTAGACTCCTTCTGAATGTTGTAATCCGACAAGGTTCGACCG 440613 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || ||||||||||| ||||| || |||| || || || || | || | ||| |||||| Sbjct 440612 TCCTCCAACTGCTTTCCGGCGAAGATCAACCGTTGCTGGTCGGGCGGGATGCCTTCCTTG 440553 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || |||||| || ||| | | || || || | ||| || || | || ||| Sbjct 440552 TCCTGAATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCGACTTCAAGGGTGATC 440493 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| ||||| || || ||||| || ||||| Sbjct 440492 GTCTTTCCGGTCAACGTCTTCACAAAGATTTGCAT 440458 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| |||||||| ||||| || || ||| |||| |||| |||| |||||| || ||||| Sbjct 440193 CTCCTTTTGAATGTTGTAGTCGGAGAGAGTTCGGCCGTCTTCCAGCTGCTTGCCAGCAAA 440134 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| |||||| || || | |||| ||||||||||| ||||| || ||| Sbjct 440133 GATCAATCGCTGCTGGTCAGGAGGAATCCCCTCCTTGTCCTGGATCTTGCTCTTGACATT 440074 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || | ||| || |||| || || || ||||| ||||| || || || Sbjct 440073 GTCGATTGTATCACTTGACTCGACTTCCAAGGTGATTGTCTTTCCGGTCAAGGTCTTGAC 440014 Query 48755 AAAAATCTGCAT 48766 || |||||||| Sbjct 440013 GAAGATCTGCAT 440002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937256441902