Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001599735.1_202016-03-01] 74 sequences; 20,697,359 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq15 95.1 2e-14 >seq15 Length=506865 Score = 95.1 bits (104), Expect = 2e-14 Identities = 242/371 (65%), Gaps = 11/371 (3%) Strand=Plus/Plus Query 25934 CCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCA 25993 ||||||||||||||||| || || ||||||||| ||| || |||||||| |||| Sbjct 482777 CCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGACTGACGTTCTCCAACGAACTCA 482836 Query 25994 TCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGC 26053 || | | |||||||||||||||| || ||||| ||||| |||| ||| |||| || Sbjct 482837 TCTCCCGAGACGAGGGTCTCCACACCGACTTTGCATGCCTCCTCTTCAC---CCACCTGA 482893 Query 26054 TCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGA 26113 | ||| | || ||||| | | |||||| || || || || |||| Sbjct 482894 AACGACGACCGCACCCGGAAACCGTGGAACGCATCATCCGTGAAGCCGTCGACCTCGAAT 482953 Query 26114 AGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGA 26173 || || | | ||||||||| | | |||||| Sbjct 482954 GTGAATTCCTGACGGACGCCCTGCCCGTCTCGTTGATCGGCATGAACGAAAAGCTCATGT 483013 Query 26174 GCCAATACATTGAGTATGTGGCCGACCATCTGCT-GT-GCCAGCTGGGACTCGCCAGACT 26231 |||| |||||| || || ||||| | |||||| || ||| || ||| || || | Sbjct 483014 GCCAGTACATTCGGTTCGTCGCCGATCGTCTGCTCGTCGCC--CTTGGAAACGACAAGGT 483071 Query 26232 CTACAGTACG--CCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACC 26289 |||| ||| | |||||||||||||||||||||||||| ||| | | || || || Sbjct 483072 GTACA--ACGATACCAACCCGTTCGACTTTATGGAAAACATTTCGCTCCAGGGTAAAGCC 483129 Query 26290 AACTTCTTTGA 26300 ||||| || || Sbjct 483130 AACTTTTTCGA 483140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843940818560