Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001599735.1_202016-03-01] 74 sequences; 20,697,359 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2 120 2e-22 >seq2 Length=1446810 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| ||| || || ||||| || || || ||| || || ||||||||||| || Sbjct 440685 ACCACCTCGCAATCGCAAAACCAAGTGCAGGGTAGACTCCTTCTGAATGTTGTAATCCGA 440626 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || || |||| ||||| || |||||||| || ||||| || ||||| || |||| Sbjct 440625 CAAGGTTCGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAACCGTTGCTGGTCGGGCGG 440566 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| ||| || | | |||| ||| | ||||| || || | Sbjct 440565 GATGCCTTCCTTGTCCTGAATCTT-GGACTTGACATTGTCGATAGTGTCCGAGGACTCGA 440507 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| |||||||| || || || ||||| || |||||||| |||||| Sbjct 440506 CTTCAAGGGTGATCGTCTTTCCGGTCAACGTCTTCACAAAGATTTGCATA 440457 Score = 98.7 bits (108), Expect = 7e-16 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||| || ||||| ||| ||||| |||||||| |||||||| || || |||| ||| Sbjct 440210 ACCAGGTGCAGAGTCGACTCCTTTTGAATGTTGTAGTCGGAGAGAGTTCGGCCGTCTTCC 440151 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || || ||||| ||||| |||||||| || | || | || || ||||| Sbjct 440150 AGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCAGGAGGAATCCCCTCCTTGTCCTGG 440091 Query 33661 ATTTT-CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || || || |||| ||| | || || ||||| || || || | ||||| || | Sbjct 440090 ATCTTGCTCTTG--ACATTGTCGATTGTATCACTTGACTCGACTTCCAAGGTGATTGTCT 440033 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || || || || |||||||||||| Sbjct 440032 TTCCGGTCAAGGTCTTGACGAAGATCTGCATA 440001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703703550080