Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001599735.1_202016-03-01] 74 sequences; 20,697,359 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq15 91.5 1e-13 >seq15 Length=506865 Score = 91.5 bits (100), Expect = 1e-13 Identities = 231/348 (66%), Gaps = 5/348 (1%) Strand=Plus/Plus Query 46914 ATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGAC 46973 ||||| || ||||||||| ||||| | ||||| || ||||| || || ||||| ||| Sbjct 482806 ATGCCCGGACTGACGTTCTCCAACGAACTCATCTCCCGAGACGAGGGTCTCCACACCGAC 482865 Query 46974 TTTGCGTGTCTCTATTACAAGACGCGCGTGAATGAGAAATTAAACTCGGACACGATCCTG 47033 ||||| || ||| | || | | | |||| | || |||| || | Sbjct 482866 TTTGCATGCCTCCTCTTCA---CCCACCTGAAACGACGACCGCACCCGGAAACCGTGGAA 482922 Query 47034 AGCATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTC 47093 |||| | | || || || | ||||| || || | || | || ||||||||| Sbjct 482923 CGCATCATCCGTGAAGCCGTCGACCTCGAATGTGAATTCCTGACGGACGCCCTGCCCGTC 482982 Query 47094 GCCTTGCTGGGCATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGT 47153 | ||| | |||||||||| | || |||||| | || ||| ||| || || |||||| Sbjct 482983 TCGTTGATCGGCATGAACGAAAAGCTCATGTGCCAGTACATTCGGTTCGTCGCCGATCGT 483042 Query 47154 CTGTTGGTGCAGCTCGGACAACCGAAATATTTT-AATGCTCGTAATCCGTTTGAGTTTAT 47212 ||| | || || ||| ||| || | | || | | || ||||| || ||||| Sbjct 483043 CTGCTCGTCGCCCTTGGA-AACGACAAGGTGTACAACGATACCAACCCGTTCGACTTTAT 483101 Query 47213 GAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGT 47260 | | |||||||||||| |||| ||| |||| ||||||||| ||| || Sbjct 483102 GGAAAACATTTCGCTCCAGGGTAAAGCCAACTTTTTCGAGTCACGCGT 483149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610759134640