Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Naganishia_20albida_20[genbank_20GCA_5F001599735.1_202016-03-01] 74 sequences; 20,697,359 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq22 84.2 3e-11 >seq22 Length=364263 Score = 84.2 bits (92), Expect = 3e-11 Identities = 264/404 (65%), Gaps = 4/404 (1%) Strand=Plus/Minus Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788 ||| | | |||| ||||| || ||||||||||| || | |||| ||||| || || Sbjct 67488 CGCGAAAGCACCGGGTCGCTTGTTACCTCCCTGGTCGACGTATCGAGCAGTCGCATCGTA 67429 Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTG-TTCCAGAAATATAACTTC 76847 | ||| | ||| || | || || || || ||||| ||| |||| | ||| || || Sbjct 67428 AGCTCGAAGCATGGGGACGATACCATTCGA-GTACCCGTTGGTTCCGGCAATGTACGATC 67370 Query 76848 CACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAG 76907 | || || || || ||| | || || || || || |||| ||||| | | Sbjct 67369 CCTTGGCTCGGATGTTGTGAATGTTCAATCCAATACCGCCCGCAGTTTTGGAGATCATGG 67310 Query 76908 CACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAGAAGA 76966 |||| || | ||||| ||||| ||||| || || ||| |||| | | |||| Sbjct 67309 CACAAGTCTTGAGGGTGTCGTAGATTCCCTCAATCGAGTCGTCCTTCATTGCGACCAAGA 67250 Query 76967 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGA 77026 | || ||||| ||| | ||| || || || || ||||| || || || || || Sbjct 67249 AG-CACGAAGACAACTGAGGGTGAGGCGTACCGGCGTTGAACAAGGTCGGCGAGGCGTGG 67191 Query 77027 GTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGA 77086 || || || || || | || || ||||| |||||||| ||| | || | Sbjct 67190 GTAAAGTATCGCTCGGACATGAGGTTATATGTCTCAATAACCTTTTCGACGTCTCGGCCG 67131 Query 77087 TGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTC 77130 || || || || ||||| ||||| | ||| |||||||||||||| Sbjct 67130 TGGATACCGACGGCGACTCGCATGATCATGTGCTGAGGTCGTTC 67087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933740535680