Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq70 114 2e-20 >seq70 Length=136885 Score = 114 bits (126), Expect = 2e-20 Identities = 363/560 (65%), Gaps = 12/560 (2%) Strand=Plus/Minus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || ||||| ||| ||| | |||||| || | || || | ||||| || ||||| || Sbjct 75833 CACGCGAAGTCGGTGTGCATACCCTCATCACGGCTGATGAGCTCGTTCGAGAACGTCAGG 75774 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| || || ||||| || ||||| || || ||||| || || ||||| ||||| Sbjct 75773 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATCGACGCGAACGAGCCAGAGAAGAAG 75714 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGT--- 24311 || || || || || || ||||||||||| | ||| | || | | || ||| Sbjct 75713 ATACCCTCGACCGCTGCGAAGGCAATAAGAC--GCTCGGCGAACGAGGATTTCTTGTCCG 75656 Query 24312 --ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCAT 24369 ||||| | ||||| || |||||||| || | || || || || || || || | Sbjct 75655 AGATCCAACGGAGGGCCCAGTCCGCCTTCTTCTTGATGCAGGGGATGGTGTCGATCGCGT 75596 Query 24370 TAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACA 24429 ||| || | | | | || || | ||| || || || | || ||| Sbjct 75595 CAAACAGGTGCTCACGCTGCGTGGGGTCCTTGATATAGGTGTCGATGAGGAGCGAGTACG 75536 Query 24430 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAA 24489 | || || || ||||| || || || || || |||||||| || | ||||| | || Sbjct 75535 TCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACCGTGCCTCAGCAA 75476 Query 24490 TCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 24549 ||||||||| | | || || || | | ||| ||||| || || ||||| || | Sbjct 75475 CCTGTACTTCGTTGGAGAACCGCTCGACGAGATTCTCATTGACAATGCCGTCGGACGCAG 75416 Query 24550 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AGTTTATTC 24605 | ||||| || | || || || || | ||||| | ||| | || | | Sbjct 75415 CGAAAAAGGCGAGGACGTGCGAGATGAAGTGGCGCTCGTC-GTCGTTCAGACGGTTGTGC 75357 Query 24606 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 24665 || |||| | || || |||| |||| || || | ||||| || || ||||| ||| Sbjct 75356 CAGTCATGCAGGTCCTTGGATAGGTCCATCTCCTCTGCGGTCCAGAACGACGCCTCAGCC 75297 Query 24666 TTTTTATACATATTCCAGAT 24685 || || ||||| | |||||| Sbjct 75296 TTCTTGTACATCTGCCAGAT 75277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593716315877760