Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Obba_20rivulosa_20[genbank_20GCA_5F001687445.1_202016-07-21] 712 sequences; 34,037,596 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq52 91.5 1e-13 seq1 87.8 2e-12 >seq52 Length=153599 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 20968 CCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCA 21027 ||| ||| | ||| |||||| || ||||| ||||||| || || || |||| || | Sbjct 49704 CCAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCTTCGA 49645 Query 21028 GCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGA 21087 |||| ||||||||| | || || | ||||||||| || | ||| |||||||| | Sbjct 49644 GCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAA 49585 Query 21088 TCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGC 21147 | || || || | | | | || || || |||| || | ||| |||||||||| Sbjct 49584 TTTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCCACCTCGAGGGTGATGGTCTTGC 49525 Query 21148 CGGTTAACGTTTTGACAAATATTTGCAT 21175 | || ||||| ||||| || || ||||| Sbjct 49524 CCGTCAACGTCTTGACGAAAATCTGCAT 49497 >seq1 Length=721539 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032 |||| || |||||||| || || || ||||| | || ||| | ||||||||||||| Sbjct 158184 TGCAGGGTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGACCGTCCTCCAGCTGC 158243 Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092 ||||| || | ||||| | ||||||||| || | ||| |||||||| ||||| Sbjct 158244 TTGCCGGCGAAGATAAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGAATCTTC 158303 Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152 ||||| | | ||| || ||| || || || | || ||||||||||| || Sbjct 158304 GCCTTCACGTTGTCGATCGTGTCAGAGGATTCGACCTCGAGCGTGATGGTCTTGCCCGTC 158363 Query 21153 AACGTTTTGACAAATATTTGCAT 21175 | || ||||| || || ||||| Sbjct 158364 AGGGTCTTGACGAAGATCTGCAT 158386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422255535845792